BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025C08SP1|AL428357
(840 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1581 1654 0.0
>3x_Contig1581
Length = 11429
Score = 1654 bits (833), Expect = 0.0
Identities = 837/840 (99%)
Strand = Plus / Minus
Query: 1 atccgnttcatgatgtttgcaatcgaataagtaacgggacttagcataccgattagttgg 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6577 atccgtttcatgatgtttgcaatcgaataagtaacgggacttagcataccgattagttgg 6518
Query: 61 aatgctaacatggcttggaagaaatgagcaaccccgtgaatwagaactagtgtcattacg 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 6517 aatgctaacatggcttggaagaaatgagcaaccccgtgaattagaactagtgtcattacg 6458
Query: 121 ctcggcgacaaatcagcgaaaactgaggtagagctggaaaaaacttcgttcgatacgaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6457 ctcggcgacaaatcagcgaaaactgaggtagagctggaaaaaacttcgttcgatacgaag 6398
Query: 181 attgggaaagttaaaataaaaccgacacatgagcaatagaataaaatggtaattttgtcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6397 attgggaaagttaaaataaaaccgacacatgagcaatagaataaaatggtaattttgtcc 6338
Query: 241 aactggatcggtgagtctttctgggactttagctctactagattcagttgtgatttgttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6337 aactggatcggtgagtctttctgggactttagctctactagattcagttgtgatttgttc 6278
Query: 301 ttacagggtagaacatcttttgacttaactgtcaaaattcctttggcaaaaatgttttgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6277 ttacagggtagaacatcttttgacttaactgtcaaaattcctttggcaaaaatgttttgt 6218
Query: 361 gatacaaagatcaccatagaaataaaagcaaacgatagacccattgagaaagttgtttta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6217 gatacaaagatcaccatagaaataaaagcaaacgatagacccattgagaaagttgtttta 6158
Query: 421 tcagtctccgtaagtttgcttttattgttttgggatgtccaacacgtaatgataacacca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6157 tcagtctccgtaagtttgcttttattgttttgggatgtccaacacgtaatgataacacca 6098
Query: 481 aggatcaaaggaataagggtatagtaagtcatattgttatattgtcttccttttgcgaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6097 aggatcaaaggaataagggtatagtaagtcatattgttatattgtcttccttttgcgaat 6038
Query: 541 ctataatagcacacggtcgcgattggagataaagctttaacagaatgcaccaaggaaact 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6037 ctataatagcacacggtcgcgattggagataaagctttaacagaatgcaccaaggaaact 5978
Query: 601 ggaatcaaagatgtggatttatgagaggtaatatgccctacaaattggaaaatacccatt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5977 ggaatcaaagatgtggatttatgagaggtaatatgccctacaaattggaaaatacccatt 5918
Query: 661 gggaaagttgtataccatatgactttagatggtaccaggaaagtgtttaatatgcatctc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5917 gggaaagttgtataccatatgactttagatggtaccaggaaagtgtttaatatgcatctc 5858
Query: 721 gaaaatgatccattcaaataagtgggtagaattccttccgggaagtttagaactgtattc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5857 gaaaatgatccattcaaataagtgggtagaattccttccgggaagtttagaactgtattc 5798
Query: 781 ttcaattttgatgaagatacctgtggtgcatgcaaatagttagcaaacgttacaaackcg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 5797 ttcaattttgatgaagatacctgtggtgcatgcaaatagttagcaaacgttacaaacgcg 5738
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6389
Number of Sequences: 1807
Number of extensions: 6389
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 840
length of database: 10,358,551
effective HSP length: 16
effective length of query: 824
effective length of database: 10,329,639
effective search space: 8511622536
effective search space used: 8511622536
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)